已发表论文全部为SCI或EI收录，截至2017 年8 月，据Google Scholar统计所发表论文被国内外引用总计1518次，单篇论文引用前两位分别是596次和487次；据Web of Science 统计，所发表论文引用总计1240次，他引910次，其中本领域著名期刊IEEE Transactions和Automatica (IFAC 会刊) 他引115次，单篇论文引用前两位分别是498次和389次。两篇论文入选2006-2016年ESI高引用率论文。部分论文如下：
【18】J. Zhou, J. A. Lu and J. H. Lü, "Pinning Adaptive Synchronization of A General Complex Dynamical Network," Automatica, vol. 44, no. 4, pp. 996-1003, 2008. （WoS Cited times: 389）
【17】J. Zhou, W. W. Yu, X. M. Li, M. Small, and J. A. Lu, "Identifying the Topology of a Coupled FitzHugh-Nagumo Neurobiological Network via a Pinning Mechanism," IEEE Transactions on Neural Networks, vol. 20, no. 10, pp. 1679-1684, 2009.
【16】J. Zhou, W. W. Yu, X. Q. Wu, M. Small, and J. A. Lu, "Flocking of Multi-agent Dynamical Systems Based on Pseudo-leader Mechanism," Systems and Control Letters, vol. 61, no. 1, pp. 195-202, 2012.
【15】J. Zhou, X. Q. Wu, W. W. Yu, M. Small, and J. A. Lu, "Pinning synchronization of delayed neural networks," Chaos, vol. 18, 043111, 2008.
【14】J. Zhou, X. K. Xu, J. Zhang, J. F. Sun, M. Small and J. A. Lu, "Generating an Assortative Network with A Given Degree Distribution," International Journal of Bifurcations and Chaos, vol. 18, no. 11, pp. 3495-3502, 2008.
【13】J. Zhou and J. A. Lu. "Topology Identification of Weighted Complex Dynamical Networks," Physica A, vol. 386, no. 1, pp. 481-491, 2007.
【12】J. Zhou, "Criterion for unbounded synchronous region in complex networks," Abstract and Applied Analysis, vol. 2013, 513871, 2013.
【11】M. M. Xu, *J. Zhou, J. A. Lu,and X. Q. Wu, "Synchronizability of two-layer networks," The European Physical Journal B, vol. 88, 240, 2015.
【10】徐明明, 陆君安, *周进, "两层星型网络的特征值谱及同步能力," 物理学报, 第65卷, 028902, 2016.
【9】J. Zhou, J. A. Lu and X. Q. Wu, "Linearly and Nonlinearly Bidirectionally Coupled Synchronization of Hyperchaotic Systems," Chaos, Solitons and Fractals, vol. 31, pp. 230–235, 2007.
【8】M. Small, X. K. Xu, *J. Zhou, J. Zhang, J. F. Sun, and J. A. Lu, "Scale-free Networks which are Highly Assortative but not Small World," Physical Review E, vol. 77, 066112, 2008.
【7】J. Chen, J. A. Lu, *J. Zhou, "Topology identification of complex networks from noisy time series using ROC curve analysis," Nonlinear Dynamics, vol. 2013, no. 74, DOI: 10.1007/s11071-013-1102-6, 2013.
【5】X. Q. Wu, W. X. Zheng, and J. Zhou, "Generalized outer synchronization between complex dynamical networks," Chaos, vol. 19, 013109, 2009.
【4】J. F. Sun, J. Zhang, J. Zhou, X. K. Xu, and M. Small, "Detecting Phase Synchronization in Noisy Data from Coupled Chaotic Oscillators," Physical Review E, vol. 77, 046213, 2008.
【3】X. M. Li, M. H. Zeng, J. Zhou, and K. Z. Li, "Hierarchy property of traffic networks," Chinese Physics B, vol. 19, no. 9, 095510, 2010.
【2】J. Zhou, J. A. Lu, J. H. Lü. Adaptive Pinning Synchronization of A General Complex Dynamical Network. IEEE International Symposium on Circuits and Systems, New Orleans, USA, May 2007.
【1】J. Zhou, J. A. Lu, J. H. Lü. Adaptive Synchronization Criteria of Uncertain Complex Dynamical Networks. IEEE World Congress on Intelligent Control and Automation, Dalian, China, Jun 2006, pp 6-10.